BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E10LP1|AL426543
(830 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig226 958 0.0
>3x_Contig226
Length = 1863
Score = 958 bits (483), Expect = 0.0
Identities = 603/639 (94%), Gaps = 3/639 (0%)
Strand = Plus / Plus
Query: 1 atccagctaacttcttggattgtggtggtggtgccactccggaaactatcgaaactgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 atccagctaacttcttggattgtggtggtggtgccactccggaaactatcgaaactgctt 1114
Query: 61 tcaagt-gatcttgtccaacgataacgtcgatgccatcttcgttaacattttcggtggta 119
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 tcaagttgatcttgtccaacgataacgtcgatgccatcttcgttaacattttcggtggta 1174
Query: 120 ttgtcagatgtgatttcgtcgctcaaggtctagtcgctgctaccaagaacttgtctgtca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 ttgtcagatgtgatttcgtcgctcaaggtctagtcgctgctaccaagaacttgtctgtca 1234
Query: 180 aggtcccaattgttgctcgtctacaaggtaccaacttggaacaaggtagacgaattatcg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1235 aggtcccaattgttgctcgtctacaaggtaccaacttggaacaaggtagacgaattatcg 1294
Query: 240 ctgaatccggtttgaagatctattccttcgacgaattggacccagctgctgaaaaggttg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1295 ctgaatccggtttgaagatctattccttcgacgaattggacccagctgctgaaaaggttg 1354
Query: 300 ttgagttgactaatagcaaataagcgagcgtctgaaaaag-tgtttcccaactgttcttt 358
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 1355 ttgagttgactaatagcaaataagcgagcgtctgacaaagatgtttcccaactgttcttt 1414
Query: 359 ctctctctctctctctctttgttttttttcttgtcacttatacaccattcgtgcaaacaa 418
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1415 ctctctctctctctctctttgtttttcttcttgtcacttatacaccattcgtgcaaacaa 1474
Query: 419 atcatatacatattcaataacccaaatttacgctgacgatgatgataacgattat-gatc 477
||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||
Sbjct: 1475 atcatatacatattcaataacccaaatttacgccgacgaccatcataacgattatcaata 1534
Query: 478 atgataacaaccagttgttaaatctctcttacgatatattataaataggaatacaaattt 537
| ||||||||| || ||||||| | | ||||||||||||||||| | ||||||||||||
Sbjct: 1535 acgataacaacacgtcgttaaatattttttacgatatattataaacacgaatacaaattt 1594
Query: 538 ctacgtaaccatttacactactgctactactctcgcaccatttataaaaaacctatctaa 597
|||||||| ||||| ||||| ||||||||||||| || ||||| ||| |||||||||||
Sbjct: 1595 ttacgtaacaatttaaactaccgctactactctcgaacaatttacaaacaacctatctaa 1654
Query: 598 agcagccttttagcaaactatcagtcttctttattttat 636
|| || |||| | ||||||| || |||||||||||||
Sbjct: 1655 cgccgctttttcgaaaactatacgtattctttattttat 1693
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,426
Number of Sequences: 1807
Number of extensions: 10426
Number of successful extensions: 307
Number of sequences better than 1.0e-20: 1
length of query: 830
length of database: 10,358,551
effective HSP length: 16
effective length of query: 814
effective length of database: 10,329,639
effective search space: 8408326146
effective search space used: 8408326146
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)